Originally Posted by
Cantab
Christina, what happens when you compare blinkies in camera with the clipping in LR? I have several memory cards on the go so I was able to put my bald eagle card back in the camera to see which images showed up as clipped there. But as Dan noted earlier, the histogram (and presumably blinkies) are based on the JPEG, with whatever jpeg picture style your camera has baked into the image. But as he said most of the picture style settings (eg. contrast) would increase the likelihood of the jpeg clipping.
(I think what Dan referred to as picture control setting is what in the Canon world are picture style settings. These are not modes such as shutter priority or manual but things that the camera does to the jpeg image before baking it. But since I know next to nothing about Nikons, I'll be interested to see what others say.)