Mark,
Just for fun on the subject of AF checking and calibration here's some real world observational trivia;
a) Using my D300 with an 18-200 lens at 70mm 2.5 mtrs from the test chart you showed I can achieve 20mm linear movement (varying distance from chart) of the camera whilst the green focus dot remains on.
b) AF accuracy in live view was not consistent at all with a well lit target. 50% of the time I could tweak focus manually to achieve a sharper image from what AF had selected.
c) The first article you linked to has two dubious areas;
1) When undertaking the test (after the initial Live View reference shot) it does not advise you to 'de focus alternately between near and far' before taking your AF test shots
2) Reference is made that in Live View because focus confirmation happens electronically through the camera sensor, it will always be accurate
Whilst the above is trivia it does support the fact that if you do not undertake these tests with an awareness of such things as repeatability, dead-bands and tolerances you can simply end up making adjustments which in real world terms you ain't gonna recognise in an image anyway.
Yes it was raining today and I was stuck inside bored.
Grahame